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» Models and Methods in Comparative Genomics
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BMCBI
2004
208views more  BMCBI 2004»
13 years 11 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein
BMVC
2002
14 years 1 months ago
Comparing Variations on the Active Appearance Model Algorithm
The Active Appearance Model (AAM) algorithm has proved to be a successful method for matching statistical models of appearance to new images. Since the original algorithm was desc...
Timothy F. Cootes, Panachit Kittipanya-ngam
TREC
2004
14 years 11 days ago
BioText Team Experiments for the TREC 2004 Genomics Track
The BioText group participated in the two main tasks of the TREC 2004 Genomics track. Our approach to the ad hoc task was similar to the one used in the 2003 Genomics track, but d...
Preslav Nakov, Ariel S. Schwartz, Emilia Stoica, M...
BMCBI
2008
126views more  BMCBI 2008»
13 years 11 months ago
ISOL@: an Italian SOLAnaceae genomics resource
Background: Present-day `-omics' technologies produce overwhelming amounts of data which include genome sequences, information on gene expression (transcripts and proteins) a...
Maria Luisa Chiusano, Nunzio D'Agostino, Alessandr...
BMCBI
2010
101views more  BMCBI 2010»
13 years 11 months ago
Comparative analysis of thermophilic and mesophilic proteins using Protein Energy Networks
Background: Thermophilic proteins sustain themselves and function at higher temperatures. Despite their structural and functional similarities with their mesophilic homologues, th...
M. S. Vijayabaskar, Saraswathi Vishveshwara