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» Models and Methods in Comparative Genomics
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JMLR
2010
133views more  JMLR 2010»
13 years 5 months ago
Hierarchical Cost-Sensitive Algorithms for Genome-Wide Gene Function Prediction
In this work we propose new ensemble methods for the hierarchical classification of gene functions. Our methods exploit the hierarchical relationships between the classes in diffe...
Nicolò Cesa-Bianchi, Giorgio Valentini
ISMB
2000
14 years 11 days ago
Pattern Recognition of Genomic Features with Microarrays: Site Typing of Mycobacterium Tuberculosis Strains
Mycobacterium tuberculosis (M. tb.) strains differ in the number and locations of a transposon-like insertion sequence known as IS6110. Accurate detection of this sequence can be ...
Soumya Raychaudhuri, Joshua M. Stuart, Xuemin Liu,...
ICIP
2006
IEEE
14 years 5 months ago
Lossless Compression of Microarray Images
During the past years, the development of microarray technology has been remarkable, and it is becoming a daily tool in many genomic research laboratories. The widespread adoption...
António J. R. Neves, Armando J. Pinho
BMCBI
2010
208views more  BMCBI 2010»
13 years 11 months ago
Calculation of accurate small angle X-ray scattering curves from coarse-grained protein models
Background: Genome sequencing projects have expanded the gap between the amount of known protein sequences and structures. The limitations of current high resolution structure det...
Kasper Stovgaard, Christian Andreetta, Jesper Ferk...
BMCBI
2008
123views more  BMCBI 2008»
13 years 11 months ago
Validation of protein models by a neural network approach
Background: The development and improvement of reliable computational methods designed to evaluate the quality of protein models is relevant in the context of protein structure re...
Paolo Mereghetti, Maria Luisa Ganadu, Elena Papale...