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CF
2007
ACM
14 years 29 days ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...
TSE
2011
114views more  TSE 2011»
13 years 3 months ago
Loupe: Verifying Publish-Subscribe Architectures with a Magnifying Lens
Abstract— The Publish-Subscribe (P/S) communication paradigm fosters high decoupling among distributed components. This facilitates the design of dynamic applications, but also i...
Luciano Baresi, Carlo Ghezzi, Luca Mottola
HIPC
2007
Springer
14 years 25 days ago
Accomplishing Approximate FCFS Fairness Without Queues
First Come First Served (FCFS) is a policy that is accepted for implementing fairness in a number of application domains such as scheduling in Operating Systems, scheduling web req...
K. Subramani, Kamesh Madduri
BMCBI
2010
191views more  BMCBI 2010»
13 years 9 months ago
BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions
Background: Genome-scale metabolic reconstructions under the Constraint Based Reconstruction and Analysis (COBRA) framework are valuable tools for analyzing the metabolic capabili...
Jan Schellenberger, Junyoung O. Park, Tom M. Conra...
BMCBI
2011
13 years 4 months ago
Bio: : Phylo - phyloinformatic analysis using Perl
Background: Phyloinformatic analyses involve large amounts of data and metadata of complex structure. Collecting, processing, analyzing, visualizing and summarizing these data and...
Rutger A. Vos, Jason Caravas, Klaas Hartmann, Mark...