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CSB
2005
IEEE
210views Bioinformatics» more  CSB 2005»
14 years 11 days ago
Problem Solving Environment Approach to Integrating Diverse Biological Data Sources
Scientists face an ever-increasing challenge in investigating biological systems with high throughput experimental methods such as mass spectrometry and gene arrays because of the...
Eric G. Stephan, Kyle R. Klicker, Mudita Singhal, ...
BIODATAMINING
2008
119views more  BIODATAMINING 2008»
13 years 6 months ago
A survey of visualization tools for biological network analysis
The analysis and interpretation of relationships between biological molecules, networks and concepts is becoming a major bottleneck in systems biology. Very often the pure amount ...
Georgios A. Pavlopoulos, Anna-Lynn Wegener, Reinha...
GG
2010
Springer
13 years 7 months ago
Verification of Graph Transformation Systems with Context-Free Specifications
We introduce an analysis method for graph transformation systems which checks that certain forbidden graphs are not reachable from the start graph. These forbidden graphs are speci...
Barbara König, Javier Esparza
BMCBI
2006
118views more  BMCBI 2006»
13 years 6 months ago
Exploration of biological network centralities with CentiBiN
Background: The elucidation of whole-cell regulatory, metabolic, interaction and other biological networks generates the need for a meaningful ranking of network elements. Central...
Björn H. Junker, Dirk Koschützki, Falk S...
CLUSTER
2005
IEEE
13 years 8 months ago
SymbioticSphere: Towards an Autonomic Grid Network System
This paper describes SymbioticSphere, a novel biologically-inspired architecture that allows grid systems (application services and middleware platforms) to be scalable and adapti...
Paskorn Champrasert, Chonho Lee, Junichi Suzuki