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DAGSTUHL
2011
12 years 8 months ago
Salient Frame Detection for Molecular Dynamics Simulations
Saliency-based analysis can be applied to time-varying 3D datasets purpose of summarization, abstraction, and motion analysis. As the sizes of time-varying datasets continue to gro...
Youngmin Kim, Robert Patro, Cheuk Yiu Ip, Dianne P...
COMPGEOM
1994
ACM
13 years 12 months ago
Spheres, Molecules, and Hidden Surface Removal
We devise techniques to manipulate a collection of loosely interpenetrating spheres in threedimensional space. Our study is motivated by the representation and manipulation of mol...
Dan Halperin, Mark H. Overmars
MICCAI
2008
Springer
14 years 9 months ago
Kinetic Modeling Based Probabilistic Segmentation for Molecular Images
Abstract. We propose a semi-supervised, kinetic modeling based segmentation technique for molecular imaging applications. It is an iterative, self-learning algorithm based on uncer...
Ahmed Saad, Benjamin Smith 0002, Ghassan Hamarneh,...
FCCM
2007
IEEE
169views VLSI» more  FCCM 2007»
14 years 2 months ago
FPGA-Based Multigrid Computation for Molecular Dynamics Simulations
Abstract: FPGA-based acceleration of molecular dynamics (MD) has been the subject of several recent studies. Implementing long-range forces, however, has only recently been address...
Yongfeng Gu, Martin C. Herbordt
SC
1995
ACM
13 years 12 months ago
I/O Limitations in Parallel Molecular Dynamics
Abstract We discuss data production rates and their impact on the performance of scientific applications using parallel computers. On one hand, too high rates of data production c...
Terry W. Clark, L. Ridgway Scott, Stanislaw Wloked...