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ISMB
1997
13 years 10 months ago
Standardized Representations of the Literature: Combining Diverse Sources of Ribosomal Data
We are building a knowledge base (KB) of published structural data on the 30s ribosomal subunit in prokaryotes. Our KB is distinguished by a standardized representation of biologi...
Russ B. Altman, Neil F. Abernethy, Richard O. Chen
IJPRAI
2010
151views more  IJPRAI 2010»
13 years 7 months ago
Structure-Embedded AUC-SVM
: AUC-SVM directly maximizes the area under the ROC curve (AUC) through minimizing its hinge loss relaxation, and the decision function is determined by those support vector sample...
Yunyun Wang, Songcan Chen, Hui Xue
BIBE
2007
IEEE
114views Bioinformatics» more  BIBE 2007»
14 years 3 months ago
A Hierarchical Grow-and-Match Algorithm for Backbone Resonance Assignments Given 3D Structure
Abstract—This paper develops an algorithm for NMR backbone resonance assignment given a 3D structure and a set of relatively sparse 15 N-edited NMR data, with the through-space 1...
Fei Xiong, Chris Bailey-Kellogg
BMCBI
2010
150views more  BMCBI 2010»
13 years 9 months ago
Evolutionary rates at codon sites may be used to align sequences and infer protein domain function
Background: Sequence alignments form part of many investigations in molecular biology, including the determination of phylogenetic relationships, the prediction of protein structu...
Pierre M. Durand, Scott Hazelhurst, Theresa L. Coe...
CVPR
2008
IEEE
14 years 11 months ago
Robust estimation of gaussian mixtures from noisy input data
We propose a variational bayes approach to the problem of robust estimation of gaussian mixtures from noisy input data. The proposed algorithm explicitly takes into account the un...
Shaobo Hou, Aphrodite Galata