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    BMCBI
    2008
    111views more  BMCBI 2008»
    A perl package and an alignment tool for phylogenetic networks
    13 years 8 months ago
    A perl package and an alignment tool for phylogenetic networks
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    Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
    Gabriel Cardona, Francesc Rosselló, Gabriel...
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    BMCBI
    2008
    91views more  BMCBI 2008»
    Presenting and exploring biological pathways with PathVisio
    13 years 8 months ago
    Presenting and exploring biological pathways with PathVisio
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    nd: Biological pathways are a useful abstraction of biological concepts, and software tools to deal with pathway diagrams can help biological research. PathVisio is a new visualiz...
    Martijn P. van Iersel, Thomas Kelder, Alexander R....
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    BMCBI
    2006
    233views more  BMCBI 2006»
    AbMiner: A bioinformatic resource on available monoclonal antibodies and corresponding gene identifiers for genomic, proteomic,
    13 years 8 months ago
    AbMiner: A bioinformatic resource on available monoclonal antibodies and corresponding gene identifiers for genomic, proteomic,
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    Background: Monoclonal antibodies are used extensively throughout the biomedical sciences for detection of antigens, either in vitro or in vivo. We, for example, have used them fo...
    Sylvia M. Major, Satoshi Nishizuka, Daisaku Morita...
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    BMCBI
    2006
    180views more  BMCBI 2006»
    The Gaggle: An open-source software system for integrating bioinformatics software and data sources
    13 years 8 months ago
    The Gaggle: An open-source software system for integrating bioinformatics software and data sources
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    Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
    Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
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    BMCBI
    2006
    156views more  BMCBI 2006»
    Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models
    13 years 8 months ago
    Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models
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    Background: Horizontal gene transfer (HGT) is considered a strong evolutionary force shaping the content of microbial genomes in a substantial manner. It is the difference in spee...
    Stephan Waack, Oliver Keller, Roman Asper, Thomas ...
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