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    BMCBI
    2005
    198views more  BMCBI 2005»
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
    13 years 10 months ago
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
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    Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
    Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
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    SAC
    2009
    ACM
    139views Applied Computing» more  SAC 2009»
    A new protein motif extraction framework based on constrained co-clustering
    14 years 5 months ago
    A new protein motif extraction framework based on constrained co-clustering
    Download  compbio.di.unito.it
    Signal finding (pattern discovery) in biological sequences is a fundamental problem in both computer science and molecular biology. Many approaches have been proposed for extract...
    Francesca Cordero, Alessia Visconti, Marco Botta
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    BMCBI
    2008
    130views more  BMCBI 2008»
    A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
    13 years 11 months ago
    A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
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    Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
    Kevin Brick, Elisabetta Pizzi
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