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RECOMB
2005
Springer
14 years 9 months ago
Rapid Protein Side-Chain Packing via Tree Decomposition
This paper proposes a novel tree decomposition based side-chain assignment algorithm, which can obtain the globally optimal solution of the side-chain packing problem very efficien...
Jinbo Xu
RECOMB
2005
Springer
14 years 9 months ago
Pairwise Local Alignment of Protein Interaction Networks Guided by Models of Evolution
Abstract. With ever increasing amount of available data on protein-protein interaction (PPI) networks and research revealing that these networks evolve at a modular level, discover...
Mehmet Koyutürk, Ananth Grama, Wojciech Szpan...
STOC
2003
ACM
188views Algorithms» more  STOC 2003»
14 years 9 months ago
Almost random graphs with simple hash functions
We describe a simple randomized construction for generating pairs of hash functions h1, h2 from a universe U to ranges V = [m] = {0, 1, . . . , m - 1} and W = [m] so that for ever...
Martin Dietzfelbinger, Philipp Woelfel
SIGMOD
2004
ACM
189views Database» more  SIGMOD 2004»
14 years 8 months ago
A Holistic Paradigm for Large Scale Schema Matching
Schema matching is a critical problem for integrating heterogeneous information sources. Traditionally, the problem of matching multiple schemas has essentially relied on finding ...
Bin He, Kevin Chen-Chuan Chang
PODS
2005
ACM
211views Database» more  PODS 2005»
14 years 8 months ago
Join-distinct aggregate estimation over update streams
There is growing interest in algorithms for processing and querying continuous data streams (i.e., data that is seen only once in a fixed order) with limited memory resources. Pro...
Sumit Ganguly, Minos N. Garofalakis, Amit Kumar, R...