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CAV
2010
Springer
282views Hardware» more  CAV 2010»
14 years 2 days ago
A NuSMV Extension for Graded-CTL Model Checking
Graded-CTL is an extension of CTL with graded quantifiers which allow to reason about either at least or all but any number of possible futures. In this paper we show an extension...
Alessandro Ferrante, Maurizio Memoli, Margherita N...
BMCBI
2010
101views more  BMCBI 2010»
13 years 8 months ago
Hidden Markov model speed heuristic and iterative HMM search procedure
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...
L. Steven Johnson, Sean R. Eddy, Elon Portugaly
BMCBI
2008
93views more  BMCBI 2008»
13 years 8 months ago
A software application for comparing large numbers of high resolution MALDI-FTICR MS spectra demonstrated by searching candidate
Background: A JavaTM application is presented, which compares large numbers (n > 100) of raw FTICR mass spectra from patients and controls. Two peptide profile matrices can be ...
Mark K. Titulaer, Dana A. N. Mustafa, Ivar Siccama...
PRIB
2010
Springer
242views Bioinformatics» more  PRIB 2010»
13 years 6 months ago
Consensus of Ambiguity: Theory and Application of Active Learning for Biomedical Image Analysis
Abstract. Supervised classifiers require manually labeled training samples to classify unlabeled objects. Active Learning (AL) can be used to selectively label only “ambiguous...
Scott Doyle, Anant Madabhushi
BMCBI
2011
13 years 3 months ago
Learning genetic epistasis using Bayesian network scoring criteria
Background: Gene-gene epistatic interactions likely play an important role in the genetic basis of many common diseases. Recently, machine-learning and data mining methods have be...
Xia Jiang, Richard E. Neapolitan, M. Michael Barma...