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100
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CSR
2006
Springer
15 years 6 months ago
All Semi-local Longest Common Subsequences in Subquadratic Time
For two strings a, b of lengths m, n respectively, the longest common subsequence (LCS) problem consists in comparing a and b by computing the length of their LCS. In this paper, w...
Alexandre Tiskin
112
Voted
GBRPR
2007
Springer
15 years 6 months ago
Generalized vs Set Median Strings for Histogram-Based Distances: Algorithms and Classification Results in the Image Domain
We compare different statistical characterizations of a set of strings, for three different histogram-based distances. Given a distance, a set of strings may be characterized by it...
Christine Solnon, Jean-Michel Jolion
DIS
2004
Springer
15 years 8 months ago
Finding Optimal Pairs of Cooperative and Competing Patterns with Bounded Distance
We consider the problem of discovering the optimal pair of substring patterns with bounded distance α, from a given set S of strings. We study two kinds of pattern classes, one is...
Shunsuke Inenaga, Hideo Bannai, Heikki Hyyrö,...
153
Voted
BALT
2006
15 years 6 months ago
Introducing Softness into Inductive Queries on String Databases
In many application domains (e.g., WWW mining, molecular biology), large string datasets are available and yet under-exploited. The inductive database framework assumes that both s...
Ieva Mitasiunaite, Jean-François Boulicaut
107
Voted
CSB
2003
IEEE
15 years 8 months ago
Fast and Sensitive Probe Selection for DNA Chips Using Jumps in Matching Statistics
The design of large scale DNA microarrays is a challenging problem. So far, probe selection algorithms must trade the ability to cope with large scale problems for a loss of accur...
Sven Rahmann