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CCE
2005
13 years 7 months ago
Large-scale inference of the transcriptional regulation of Bacillus subtilis
This paper addresses the inference of the transcriptional regulatory network of Bacillus subtilis. Two inference approaches, a linear, additive model and a non-linear power-law mo...
Anshuman Gupta, Jeffrey D. Varner, Costas D. Maran...
GECCO
2006
Springer
202views Optimization» more  GECCO 2006»
13 years 11 months ago
Inference of genetic networks using S-system: information criteria for model selection
In this paper we present an evolutionary approach for inferring the structure and dynamics in gene circuits from observed expression kinetics. For representing the regulatory inte...
Nasimul Noman, Hitoshi Iba
GECCO
2005
Springer
178views Optimization» more  GECCO 2005»
14 years 1 months ago
A co-evolutionary hybrid algorithm for multi-objective optimization of gene regulatory network models
In this paper, the parameters of a genetic network for rice flowering time control have been estimated using a multiobjective genetic algorithm approach. We have modified the rece...
Praveen Koduru, Sanjoy Das, Stephen Welch, Judith ...
EOR
2011
66views more  EOR 2011»
13 years 2 months ago
Modeling, inference and optimization of regulatory networks based on time series data
Gerhard-Wilhelm Weber, Ozlem Defterli, Sirma Zeyne...
GECCO
2008
Springer
179views Optimization» more  GECCO 2008»
13 years 9 months ago
Evolution of discrete gene regulatory models
Gene regulatory networks (GRNs) are complex control systems that govern the interaction of genes, which ultimately control cellular processes at the protein level. GRNs can be ted...
Afshin Esmaeili, Christian Jacob