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AINA
2008
IEEE
13 years 7 months ago
Communication Protocols and Message Formats for BLAST Parallelization on Cluster Systems
With the widespread use of BLAST, many parallel versions of BLAST on cluster systems are announced, but little work has been done for the parallel execution in the search for indi...
Hong-Soog Kim, Woo-Hyuk Jang, Dong-Soo Han
PC
2000
95views Management» more  PC 2000»
13 years 7 months ago
Massively parallel computing using commodity components
The Computational Plant (Cplant) project at Sandia National Laboratories is developing a large-scale, massively parallel computing resource from a cluster of commodity computing a...
Ron Brightwell, Lee Ann Fisk, David S. Greenberg, ...
IPPS
2007
IEEE
14 years 2 months ago
Modeling of NAMD's Network Input/Output on Large PC Clusters
This study examined the interplay among processor speed, cluster interconnect and file I/O, using parallel applications to quantify interactions. We focused on a common case wher...
Nancy Tran, Daniel A. Reed
IPPS
1999
IEEE
14 years 2 hour ago
The Impact of Memory Hierarchies on Cluster Computing
Using off-the-shelf commodity workstations and PCs to build a cluster for parallel computing has become a common practice. A choice of a cost-effective cluster computing platform ...
Xing Du, Xiaodong Zhang
CLUSTER
2006
IEEE
14 years 1 months ago
A Parallel Algorithm for the Solution of the Deconvolution Problem on Heterogeneous Networks
In this work we present a parallel algorithm for the solution of a least squares problem with structured matrices. This problem arises in many applications mainly related to digit...
Pedro Alonso, Antonio M. Vidal, Alexey L. Lastovet...