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RECOMB
2005
Springer
14 years 7 months ago
Causal Inference of Regulator-Target Pairs by Gene Mapping of Expression Phenotypes
Background: Correlations between polymorphic markers and observed phenotypes provide the basis for mapping traits in quantitative genetics. When the phenotype is gene expression, ...
David Kulp, Manjunatha Jagalur
WEBI
2009
Springer
14 years 2 months ago
Social Semantics and Its Evaluation by Means of Semantic Relatedness and Open Topic Models
—This paper presents an approach using social semantics for the task of topic labelling by means of Open Topic Models. Our approach utilizes a social ontology to create an alignm...
Ulli Waltinger, Alexander Mehler
EDBT
2010
ACM
143views Database» more  EDBT 2010»
13 years 10 months ago
Efficient and scalable multi-geography route planning
This paper considers the problem of Multi-Geography Route Planning (MGRP) where the geographical information may be spread over multiple heterogeneous interconnected maps. We firs...
Vidhya Balasubramanian, Dmitri V. Kalashnikov, Sha...
BIBM
2008
IEEE
107views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
A Functional Network of Yeast Genes Using Gene Ontology Information
In the post-genomic era, the organization of genes into networks has played an important role in characterizing the functions of individual genes and the interplay between them. I...
Erliang Zeng, Giri Narasimhan, Lisa Schneper, Kala...
BMCBI
2011
13 years 2 months ago
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and proposi
Background: Remote homology detection is a hard computational problem. Most approaches have trained computational models by using either full protein sequences or multiple sequenc...
Juliana S. Bernardes, Alessandra Carbone, Gerson Z...