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» Multiple Approximate String Matching
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IPPS
2006
IEEE
14 years 1 months ago
Implementation of a programmable array processor architecture for approximate string matching algorithms on FPGAs
Approximate string matching problem is a common and often repeated task in information retrieval and bioinformatics. This paper proposes a generic design of a programmable array p...
Panagiotis D. Michailidis, Konstantinos G. Margari...
JSA
2008
124views more  JSA 2008»
13 years 7 months ago
Processor array architectures for flexible approximate string matching
In this paper, we present linear processor array architectures for flexible approximate string matching. These architectures are based on parallel realization of dynamic programmi...
Panagiotis D. Michailidis, Konstantinos G. Margari...
VLDB
2007
ACM
107views Database» more  VLDB 2007»
14 years 7 months ago
VGRAM: Improving Performance of Approximate Queries on String Collections Using Variable-Length Grams
Many applications need to solve the following problem of approximate string matching: from a collection of strings, how to find those similar to a given string, or the strings in ...
Chen Li, Bin Wang, Xiaochun Yang
ICPR
2002
IEEE
14 years 8 months ago
A Windowed Weighted Approach for Approximate Cyclic String Matching
A method for measuring dissimilarities between cyclic strings is introduced. It computes a weighted mean between two (lower and upper) bounds of the exact cyclic edit distance, wh...
Ramón Alberto Mollineda, Enrique Vidal, Fra...
DASFAA
2003
IEEE
151views Database» more  DASFAA 2003»
14 years 27 days ago
Approximate String Matching in DNA Sequences
Approximate string matching on large DNA sequences data is very important in bioinformatics. Some studies have shown that suffix tree is an efficient data structure for approxim...
Lok-Lam Cheng, David Wai-Lok Cheung, Siu-Ming Yiu