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» Multiple Genome Alignment: Chaining Algorithms Revisited
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BMCBI
2005
122views more  BMCBI 2005»
13 years 7 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...
BMCBI
2006
137views more  BMCBI 2006»
13 years 7 months ago
Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences
Background: Phylogenetic methods which do not rely on multiple sequence alignments are important tools in inferring trees directly from completely sequenced genomes. Here, we exte...
Alexander F. Auch, Stefan R. Henz, Barbara R. Holl...
ANOR
2010
125views more  ANOR 2010»
13 years 7 months ago
A Bayesian approach for the alignment of high-resolution NMR spectra
: The rapid progresses in human genome project and biotechnologies result in the sheer volume of datasets associated with in-depth scientific knowledge. Metabolomics is defined as ...
Seoung Bum Kim, Zhou Wang, Basavaraj Hiremath
BMCBI
2008
131views more  BMCBI 2008»
13 years 7 months ago
CoCoNUT: an efficient system for the comparison and analysis of genomes
Background: Comparative genomics is the analysis and comparison of genomes from different species. This area of research is driven by the large number of sequenced genomes and hea...
Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohl...
JCB
2008
122views more  JCB 2008»
13 years 7 months ago
Space Efficient Computation of Rare Maximal Exact Matches between Multiple Sequences
In this article, we propose a new method for computing rare maximal exact matches between multiple sequences. A rare match between k sequences S1; : : :; Sk is a string that occur...
Enno Ohlebusch, Stefan Kurtz