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» Multiple Genome Alignment by Clustering Pairwise Matches
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GCB
2003
Springer
105views Biometrics» more  GCB 2003»
14 years 23 days ago
In silico prediction of UTR repeats using clustered EST data
Clustering of EST data is a method for the non-redundant representation of an organisms transcriptome. During clustering of large amounts of EST data, usually some large clusters ...
Stefan A. Rensing, Daniel Lang, Ralf Reski
CIBCB
2007
IEEE
14 years 1 months ago
Multiple Sequence Alignment using Fuzzy Logic
—DNA matching is a crucial step in sequence alignment. Since sequence alignment is an approximate matching process there is a need for good approximate algorithms. The process of...
Sara Nasser, Gregory Vert, Monica N. Nicolescu, Al...
BMCBI
2008
150views more  BMCBI 2008»
13 years 7 months ago
MOSAIC: an online database dedicated to the comparative genomics of bacterial strains at the intra-species level
Background: The recent availability of complete sequences for numerous closely related bacterial genomes opens up new challenges in comparative genomics. Several methods have been...
Hélène Chiapello, Annie Gendrault, C...
NAR
2007
109views more  NAR 2007»
13 years 7 months ago
GeneTrees: a phylogenomics resource for prokaryotes
The GeneTrees phylogenomics system pursues comparative genomic analyses from the perspective of gene phylogenies for individual genes. The GeneTrees project has the goal of provid...
Yuying Tian, Allan W. Dickerman
IMSCCS
2006
IEEE
14 years 1 months ago
GenomeBlast: A Web Tool for Small Genome Comparison
Comparative genomics has become an essential approach for identifying homologous gene candidates and their functions, and for studying genome evolution. We developed GenomeBlast, ...
Guoqing Lu, Liying Jiang, Resa M. Kotalik, Thaine ...