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BMCBI
2005
94views more  BMCBI 2005»
13 years 8 months ago
Measuring similarities between transcription factor binding sites
Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...
Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel
BMCBI
2004
106views more  BMCBI 2004»
13 years 8 months ago
Spotting effect in microarray experiments
Background: Microarray data must be normalized because they suffer from multiple biases. We have identified a source of spatial experimental variability that significantly affects...
Tristan Mary-Huard, Jean-Jacques Daudin, Sté...
BMCBI
2004
150views more  BMCBI 2004»
13 years 8 months ago
Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in Drosophila
Background: The discovery of cis-regulatory modules in metazoan genomes is crucial for understanding the connection between genes and organism diversity. It is important to quanti...
Saurabh Sinha, Mark D. Schroeder, Ulrich Unnerstal...
CORR
1999
Springer
98views Education» more  CORR 1999»
13 years 8 months ago
A variational description of the ground state structure in random satisfiability problems
A variational approach to finite connectivity spin-glass-like models is developed and applied to describe the structure of optimal solutions in random satisfiability problems. Our ...
Giulio Biroli, Rémi Monasson, Martin Weigt
TON
1998
103views more  TON 1998»
13 years 8 months ago
Using name-based mappings to increase hit rates
—Clusters of identical intermediate servers are often created to improve availability and robustness in many domains. The use of proxy servers for the World Wide Web (WWW) and of...
David Thaler, Chinya V. Ravishankar