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USENIX
1994
13 years 11 months ago
Splicing UNIX into a Genome Mapping Laboratory
The Whitehead Institute/MIT Center for Genome Research is responsible for a number of large genome mapping efforts, the scale of which create problems of data and workflow managem...
Lincoln Stein, Andre Marquis, Robert Dredge, Mary ...
CIDR
2009
167views Algorithms» more  CIDR 2009»
13 years 11 months ago
Unbundling Transaction Services in the Cloud
The traditional architecture for a DBMS engine has the recovery, concurrency control and access method code tightly bound together in a storage engine for records. We propose a di...
David B. Lomet, Alan Fekete, Gerhard Weikum, Micha...
MOBIDE
2010
ACM
13 years 10 months ago
Using data mining to handle missing data in multi-hop sensor network applications
A sensor's data loss or corruption, aka sensor data missing, is a common phenomenon in modern wireless sensor networks. It is more severe for multi-hop sensor network (MSN) a...
Le Gruenwald, Hanqing Yang, Md. Shiblee Sadik, Rah...
BMCBI
2010
104views more  BMCBI 2010»
13 years 10 months ago
Parameters for accurate genome alignment
Background: Genome sequence alignments form the basis of much research. Genome alignment depends on various mundane but critical choices, such as how to mask repeats and which sco...
Martin C. Frith, Michiaki Hamada, Paul Horton
BMCBI
2010
163views more  BMCBI 2010»
13 years 10 months ago
DraGnET: Software for storing, managing and analyzing annotated draft genome sequence data
Background: New "next generation" DNA sequencing technologies offer individual researchers the ability to rapidly generate large amounts of genome sequence data at drama...
Stacy Duncan, Ruchita Sirkanungo, Leslie Miller, G...