Sciweavers

545 search results - page 11 / 109
» Multiple Sequence Alignment Using Tabu Search
Sort
View
BMCBI
2010
121views more  BMCBI 2010»
13 years 10 months ago
MS4 - Multi-Scale Selector of Sequence Signatures: An alignment-free method for classification of biological sequences
Background: While multiple alignment is the first step of usual classification schemes for biological sequences, alignment-free methods are being increasingly used as alternatives...
Eduardo Corel, Florian Pitschi, Ivan Laprevotte, G...
GECCO
2003
Springer
128views Optimization» more  GECCO 2003»
14 years 3 months ago
Evolving Consensus Sequence for Multiple Sequence Alignment with a Genetic Algorithm
In this paper we present an approach that evolves the consensus sequence [25] for multiple sequence alignment (MSA) with genetic algorithm (GA). We have developed an encoding schem...
Conrad Shyu, James A. Foster
ICIC
2009
Springer
14 years 4 months ago
A Method for Multiple Sequence Alignment Based on Particle Swarm Optimization
Sequence Alignment is a basic information disposal method in Bioinformatics. However, it is difficult to deal with multiple sequence alignment problem(MSA). In this paper, an impro...
Fasheng Xu, Yuehui Chen
WSC
1998
13 years 11 months ago
Reactive Tabu Search in Unmanned Aerial Reconnaissance Simulations
We apply a Reactive Tabu Search (RTS) heuristic within a discrete-event simulation to solve routing problems for Unmanned Aerial Vehicles (UAVs). Our formulation represents this p...
Joel L. Ryan, T. Glenn Bailey, James T. Moore, Wil...
AINA
2006
IEEE
14 years 4 months ago
Partitioned optimization algorithms for multiple sequence alignment
Multiple sequence alignment is an important and difficult problem in molecular biology and bioinformatics. In this paper, we propose a partitioning approach that significantly impr...
Yixin Chen, Yi Pan, Juan Chen, Wei Liu, Ling Chen