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IMSCCS
2006
IEEE
14 years 4 months ago
Identification of New Members of Hydrophobin Family Using Primary Structure Analysis
Background: Hydrophobins are fungal proteins that can turn into amphipathic membranes at hydrophilic/hydrophobic interfaces by self-assembly. The assemblages by Class I hydrophobi...
Kuan Yang, Youping Deng, Chaoyang Zhang, Mohamed O...
IPPS
2005
IEEE
14 years 3 months ago
Comparison of Current BLAST Software on Nucleotide Sequences
The computational power needed for searching exponentially growing databases, such as GenBank, has increased dramatically. Three different implementations of the most widely used ...
I. Elizabeth Cha, Eric C. Rouchka
HPDC
2010
IEEE
13 years 11 months ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
HPDC
2010
IEEE
13 years 11 months ago
MPIPairwiseStatSig: parallel pairwise statistical significance estimation of local sequence alignment
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...
Ankit Agrawal, Sanchit Misra, Daniel Honbo, Alok N...
ICCV
2007
IEEE
14 years 4 months ago
Non-Rigid Object Alignment with a Mismatch Template Based on Exhaustive Local Search
Non-rigid object alignment is especially challenging when only a single appearance template is available and target and template images fail to match. Two sources of discrepancy b...
Yang Wang, Simon Lucey, Jeffrey F. Cohn