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    BMCBI
    2005
    130views more  BMCBI 2005»
    Squid - a simple bioinformatics grid
    13 years 6 months ago
    Squid - a simple bioinformatics grid
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    Background: BLAST is a widely used genetic research tool for analysis of similarity between nucleotide and protein sequences. This paper presents a software application entitled &...
    Paulo C. Carvalho, Rafael V. Glória, Antoni...
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    BMCBI
    2005
    103views more  BMCBI 2005»
    SeqDoC: rapid SNP and mutation detection by direct comparison of DNA sequence chromatograms
    13 years 6 months ago
    SeqDoC: rapid SNP and mutation detection by direct comparison of DNA sequence chromatograms
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    Background: This paper describes SeqDoC, a simple, web-based tool to carry out direct comparison of ABI sequence chromatograms. This allows the rapid identification of single nucl...
    Mark L. Crowe
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    BMCBI
    2005
    104views more  BMCBI 2005»
    Scoring functions for transcription factor binding site prediction
    13 years 6 months ago
    Scoring functions for transcription factor binding site prediction
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    Background: Transcription factor binding site (TFBS) prediction is a difficult problem, which requires a good scoring function to discriminate between real binding sites and backg...
    Markus T. Friberg, Peter von Rohr, Gaston H. Gonne...
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    BMCBI
    2005
    100views more  BMCBI 2005»
    Evolutionary models for insertions and deletions in a probabilistic modeling framework
    13 years 6 months ago
    Evolutionary models for insertions and deletions in a probabilistic modeling framework
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    Background: Probabilistic models for sequence comparison (such as hidden Markov models and pair hidden Markov models for proteins and mRNAs, or their context-free grammar counterp...
    Elena Rivas
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    BMCBI
    2005
    67views more  BMCBI 2005»
    Sequence signature analysis of chromosome identity in three Drosophila species
    13 years 6 months ago
    Sequence signature analysis of chromosome identity in three Drosophila species
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    Background: All eukaryotic organisms need to distinguish each of their chromosomes. A few protein complexes have been described that recognise entire, specific chromosomes, for in...
    Per Stenberg, Fredrik Pettersson, Anja O. Saura, A...
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