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» Multiple sequence alignment by quantum genetic algorithm
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IAJIT
2010
94views more  IAJIT 2010»
13 years 7 months ago
Multiple Warehouses Scheduling Using Steady State. Genetic Algorithms
: Warehouses scheduling is the problem of sequencing requests of products to fulfill several customers’ orders so as to minimize the average time and shipping costs. In this pape...
Jalal Atoum, Mamoun Al Rababaa
WOB
2004
120views Bioinformatics» more  WOB 2004»
13 years 10 months ago
Reconfigurable Systems for Sequence Alignment and for General Dynamic Programming
ABSTRACT. Reconfigurable systolic arrays can be adapted to efficiently resolve a wide spectrum of computational problems; parallelism is naturally explored in systolic arrays and r...
Ricardo P. Jacobi, Mauricio Ayala-Rincón, L...
ISMB
1998
13 years 10 months ago
Sequence Assembly Validation by Multiple Restriction Digest Fragment Coverage Analysis
DNA sequence analysis depends on the accurate assembly of fragment reads for the determination of a consensus sequence. This report examines the possibility of analyzing multiple,...
Eric C. Rouchka, David J. States
WABI
2005
Springer
120views Bioinformatics» more  WABI 2005»
14 years 2 months ago
Multiple Structural RNA Alignment with Lagrangian Relaxation
In contrast to proteins, many classes of functionally related RNA molecules show a rather weak sequence conservation but instead a fairly well conserved secondary structure. Hence ...
Markus Bauer, Gunnar W. Klau, Knut Reinert
IJCBDD
2008
141views more  IJCBDD 2008»
13 years 8 months ago
CLUSS2: an alignment-independent algorithm for clustering protein families with multiple biological functions
: CLUSS is an algorithm proposed for clustering both alignable and non-alignable protein sequences. However, CLUSS tends to be ineffective on protein datasets that include a large ...
Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski