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» Multipolar representation of protein structure
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GECCO
2007
Springer
154views Optimization» more  GECCO 2007»
14 years 1 months ago
A novel ab-initio genetic-based approach for protein folding prediction
In this paper, a model based on genetic algorithms for protein folding prediction is proposed. The most important features of the proposed approach are: i) Heuristic secondary str...
Sergio Raul Duarte Torres, David Camilo Becerra Ro...
BICOB
2010
Springer
14 years 18 days ago
Folding-aware and Structure-conscious 3D Substructures in Folding Data: Identification and Applications
Molecular dynamics simulations have been employed by biologists to study the protein folding problem. Such simulations have resulted in a large number of protein folding trajector...
Hui Yang, Saurabh Gupte, Runtang Wang, Rahul Parte
GCB
2004
Springer
91views Biometrics» more  GCB 2004»
14 years 1 months ago
A Method for Fast Approximate Searching of Polypeptide Structures in the PDB
: The main contribution of this paper is a novel approach for fast searching in huge structural databases like the PDB. The data structure is based on an adaption of the generalize...
Hanjo Täubig, Arno Buchner, Jan Griebsch
ISMB
1993
13 years 9 months ago
Representations of Metabolic Knowledge
Construction of electronic repositories of metabolic information is an increasingly active area of research. Encoding detailed knowledge of a complex biological domain requires ï¬...
Peter D. Karp, Monica Riley
ISMB
1994
13 years 9 months ago
Predicting Location and Structure Of beta-Sheet Regions Using Stochastic Tree Grammars
We describe and demonstrate the effectiveness of a method of predicting protein secondary structures, sheet regions in particular, using a class of stochastic tree grammars as rep...
Hiroshi Mamitsuka, Naoki Abe