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» NEC for Gene Expression Analysis
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ICDE
2000
IEEE
120views Database» more  ICDE 2000»
14 years 11 months ago
Deflating the Dimensionality Curse Using Multiple Fractal Dimensions
Nearest neighbor queries are important in many settings, including spatial databases (Find the k closest cities) and multimedia databases (Find the k most similar images). Previou...
Bernd-Uwe Pagel, Flip Korn, Christos Faloutsos
NIPS
2008
13 years 11 months ago
A mixture model for the evolution of gene expression in non-homogeneous datasets
We address the challenge of assessing conservation of gene expression in complex, non-homogeneous datasets. Recent studies have demonstrated the success of probabilistic models in...
Gerald Quon, Yee Whye Teh, Esther Chan, Timothy R....
KDD
2003
ACM
133views Data Mining» more  KDD 2003»
14 years 10 months ago
Interactive Analysis of Gene Interactions Using Graphical gaussian model
DNA microarray provides a powerful basis for analysis of gene expression. Data mining methods such as clustering have been widely applied to microarray data to link genes that sho...
Xintao Wu, Yong Ye, Kalpathi R. Subramanian
BMCBI
2004
113views more  BMCBI 2004»
13 years 10 months ago
Leveraging two-way probe-level block design for identifying differential gene expression with high-density oligonucleotide array
Background: To identify differentially expressed genes across experimental conditions in oligonucleotide microarray experiments, existing statistical methods commonly use a summar...
Leah Barrera, Chris Benner, Yong-Chuan Tao, Elizab...
BMCBI
2004
108views more  BMCBI 2004»
13 years 10 months ago
Improving the scaling normalization for high-density oligonucleotide GeneChip expression microarrays
Background: Normalization is an important step for microarray data analysis to minimize biological and technical variations. Choosing a suitable approach can be critical. The defa...
Chao Lu