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BMCBI
2008
110views more  BMCBI 2008»
13 years 7 months ago
Predikin and PredikinDB: a computational framework for the prediction of protein kinase peptide specificity and an associated da
Background: We have previously described an approach to predicting the substrate specificity of serine-threonine protein kinases. The method, named Predikin, identifies key conser...
Neil F. W. Saunders, Ross I. Brinkworth, Thomas Hu...
BMCBI
2008
131views more  BMCBI 2008»
13 years 7 months ago
CoCoNUT: an efficient system for the comparison and analysis of genomes
Background: Comparative genomics is the analysis and comparison of genomes from different species. This area of research is driven by the large number of sequenced genomes and hea...
Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohl...
BMCBI
2008
110views more  BMCBI 2008»
13 years 7 months ago
Enhancing the prediction of protein pairings between interacting families using orthology information
Background: It has repeatedly been shown that interacting protein families tend to have similar phylogenetic trees. These similarities can be used to predicting the mapping betwee...
José M. G. Izarzugaza, David de Juan, Carle...
CCR
2008
120views more  CCR 2008»
13 years 7 months ago
OpenFlow: enabling innovation in campus networks
This whitepaper proposes OpenFlow: a way for researchers to run experimental protocols in the networks they use every day. OpenFlow is based on an Ethernet switch, with an interna...
Nick McKeown, Tom Anderson, Hari Balakrishnan, Gur...
DEBU
2008
125views more  DEBU 2008»
13 years 7 months ago
Querying XML in Timber
In this paper, we describe the TIMBER XML database system implemented at University of Michigan. TIMBER was one of the first native XML database systems, designed from the ground ...
Yuqing Wu, Stelios Paparizos, H. V. Jagadish