Background: In this paper, it is proposed an optimization approach for producing reduced alphabets for peptide classification, using a Genetic Algorithm. The classification task i...
The hypergraph matching problem is to find a largest collection of disjoint hyperedges in a hypergraph. This is a well-studied problem in combinatorial optimization and graph theo...
An important goal in bioinformatics is determining the homology and function of proteins from their sequences. Pairwise sequence similarity algorithms are often employed for this ...
This paper introduces a new component based model that makes it relatively simple to prove that certain types of landscapes are elementary. We use the model to reconstruct proofs ...
Many computer vision problems can be formulated in
a Bayesian framework with Markov Random Field (MRF)
or Conditional Random Field (CRF) priors. Usually, the
model assumes that ...