429 search results - page 9 / 86 » New Algorithms for SIMD Alignment |
BMCBI
2005
13 years 7 months ago
2005
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...
BMCBI
2004
13 years 7 months ago
2004
Background: Multiple sequence alignment algorithms are very important tools in molecular biology today. Accurate alignment of proteins is central to several areas such as homology...
IPPS
2003
IEEE
14 years 1 months ago
2003
IEEE
Progressive sequence model refinement by means of iterative searches is an effective technique for high sensitivity database searches and is currently employed in popular tools s...
RECOMB
2002
Springer
14 years 8 months ago
2002
Springer
A recent idea for determining the three-dimensional structure of a protein uses antibody recognition of surface structure and random peptide libraries to map antibody epitope comb...
NAACL
2003
2003
Syntax-based Alignment of Multiple Translations: Extracting Paraphrases and Generating New Sentences
13 years 9 months ago
We describe a syntax-based algorithm that automatically builds Finite State Automata (word lattices) from semantically equivalent translation sets. These FSAs are good representat...