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BMCBI
2006
102views more  BMCBI 2006»
13 years 7 months ago
Protein secondary structure prediction for a single-sequence using hidden semi-Markov models
Background: The accuracy of protein secondary structure prediction has been improving steadily towards the 88% estimated theoretical limit. There are two types of prediction algor...
Zafer Aydin, Yucel Altunbasak, Mark Borodovsky
CORR
2010
Springer
136views Education» more  CORR 2010»
13 years 5 months ago
The Highest Expected Reward Decoding for HMMs with Application to Recombination Detection
Abstract. Hidden Markov models are traditionally decoded by the Viterbi algorithm which finds the highest probability state path in the model. In recent years, several limitations ...
Michal Nánási, Tomás Vinar, B...
ICB
2007
Springer
183views Biometrics» more  ICB 2007»
13 years 9 months ago
Factorial Hidden Markov Models for Gait Recognition
Gait recognition is an effective approach for human identification at a distance. During the last decade, the theory of hidden Markov models (HMMs) has been used successfully in th...
Changhong Chen, Jimin Liang, Haihong Hu, Licheng J...
ICML
2006
IEEE
14 years 8 months ago
Online decoding of Markov models under latency constraints
The Viterbi algorithm is an efficient and optimal method for decoding linear-chain Markov Models. However, the entire input sequence must be observed before the labels for any tim...
Mukund Narasimhan, Paul A. Viola, Michael Shilman
CEC
2005
IEEE
14 years 1 months ago
Evolving hidden Markov models for protein secondary structure prediction
New results are presented for the prediction of secondary structure information for protein sequences using Hidden Markov Models (HMMs) evolved using a Genetic Algorithm (GA). We a...
Kyoung-Jae Won, Thomas Hamelryck, Adam Prügel...