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NAR
2008
78views more  NAR 2008»
13 years 8 months ago
InParanoid 6: eukaryotic ortholog clusters with inparalogs
The InParanoid eukaryotic ortholog database (http://InParanoid.sbc.su.se/) has been updated to version 6 and is now based on 35 species. We collected all available `complete'...
Ann-Charlotte Berglund, Erik Sjölund, Gabriel...
NAR
2008
119views more  NAR 2008»
13 years 8 months ago
TreeFam: 2008 Update
TreeFam (http://www.treefam.org) was developed to provide curated phylogenetic trees for all animal gene families, as well as orthologue and paralogue assignments. Release 4.0 of ...
Jue Ruan, Heng Li, Zhongzhong Chen, Avril Coghlan,...
TCBB
2008
122views more  TCBB 2008»
13 years 8 months ago
Mixed Integer Linear Programming for Maximum-Parsimony Phylogeny Inference
Reconstruction of phylogenetic trees is a fundamental problem in computational biology. While excellent heuristic methods are available for many variants of this problem, new adva...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
CLUSTER
2002
IEEE
13 years 8 months ago
File and Object Replication in Data Grids
Data replication is a key issue in a Data Grid and can be managed in different ways and at different levels of granularity: for example, at the file level or object level. In the ...
Heinz Stockinger, Asad Samar, Koen Holtman, Willia...
PRL
2000
104views more  PRL 2000»
13 years 8 months ago
PicSOM - content-based image retrieval with self-organizing maps
We have developed a novel system for content-based image retrieval in large, unannotated databases. The system is called PicSOM, and it is based on tree structured self-organizing...
Jorma Laaksonen, Markus Koskela, Sami Laakso, Erkk...