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» New developments of the Z-EDM algorithm
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SIGSOFT
2006
ACM
16 years 2 days ago
Memories of bug fixes
The change history of a software project contains a rich collection of code changes that record previous development experience. Changes that fix bugs are especially interesting, ...
Sunghun Kim, Kai Pan, E. James Whitehead Jr.
WMPI
2004
ACM
15 years 11 months ago
The Opie compiler from row-major source to Morton-ordered matrices
The Opie Project aims to develop a compiler to transform C codes written for row-major matrix representation into equivalent codes for Morton-order matrix representation, and to a...
Steven T. Gabriel, David S. Wise
BMCBI
2010
90views more  BMCBI 2010»
15 years 6 months ago
Local alignment of generalized k-base encoded DNA sequence
Background: DNA sequence comparison is a well-studied problem, in which two DNA sequences are compared using a weighted edit distance. Recent DNA sequencing technologies however o...
Nils Homer, Stanley F. Nelson, Barry Merriman
BMCBI
2010
116views more  BMCBI 2010»
15 years 6 months ago
SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments
Background: High throughput sequencing has become an increasingly important tool for biological research. However, the existing software systems for managing and processing these ...
David B. Burdick, Christopher C. Cavnor, Jeremy Ha...
CORR
2010
Springer
177views Education» more  CORR 2010»
15 years 6 months ago
Supervised Random Walks: Predicting and Recommending Links in Social Networks
Predicting the occurrence of links is a fundamental problem in networks. In the link prediction problem we are given a snapshot of a network and would like to infer which interact...
Lars Backstrom, Jure Leskovec