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142
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RECOMB
2003
Springer
16 years 4 months ago
Joint classifier and feature optimization for cancer diagnosis using gene expression data
Recent research has demonstrated quite convincingly that accurate cancer diagnosis can be achieved by constructing classifiers that are designed to compare the gene expression pro...
Balaji Krishnapuram, Lawrence Carin, Alexander J. ...
149
Voted
BMCBI
2008
201views more  BMCBI 2008»
15 years 3 months ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...
163
Voted
TSP
2011
230views more  TSP 2011»
14 years 10 months ago
Bayesian Nonparametric Inference of Switching Dynamic Linear Models
—Many complex dynamical phenomena can be effectively modeled by a system that switches among a set of conditionally linear dynamical modes. We consider two such models: the switc...
Emily B. Fox, Erik B. Sudderth, Michael I. Jordan,...
159
Voted
BMCBI
2004
134views more  BMCBI 2004»
15 years 3 months ago
Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE)
Background: An important challenge for transcript counting methods such as Serial Analysis of Gene Expression (SAGE), "Digital Northern" or Massively Parallel Signature ...
Ricardo Z. N. Vêncio, Helena Brentani, Diogo...
UAI
2008
15 years 5 months ago
The Phylogenetic Indian Buffet Process: A Non-Exchangeable Nonparametric Prior for Latent Features
Nonparametric Bayesian models are often based on the assumption that the objects being modeled are exchangeable. While appropriate in some applications (e.g., bag-ofwords models f...
Kurt T. Miller, Thomas L. Griffiths, Michael I. Jo...