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BMCBI
2004
133views more  BMCBI 2004»
13 years 7 months ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
EVOW
2004
Springer
14 years 1 months ago
Binary Merge Model Representation of the Graph Colouring Problem
This paper describes a novel representation and ordering model that, aided by an evolutionary algorithm, is used in solving the graph k-colouring problem. Its strength lies in redu...
István Juhos, Attila Tóth, Jano I. v...
ICPP
2008
IEEE
14 years 2 months ago
TPTS: A Novel Framework for Very Fast Manycore Processor Architecture Simulation
The slow speed of conventional execution-driven architecture simulators is a serious impediment to obtaining desirable research productivity. This paper proposes and evaluates a f...
Sangyeun Cho, Socrates Demetriades, Shayne Evans, ...
GECCO
2007
Springer
154views Optimization» more  GECCO 2007»
14 years 1 months ago
A novel ab-initio genetic-based approach for protein folding prediction
In this paper, a model based on genetic algorithms for protein folding prediction is proposed. The most important features of the proposed approach are: i) Heuristic secondary str...
Sergio Raul Duarte Torres, David Camilo Becerra Ro...
TSE
2010
197views more  TSE 2010»
13 years 2 months ago
A Genetic Algorithm-Based Stress Test Requirements Generator Tool and Its Empirical Evaluation
Genetic algorithms (GAs) have been applied previously to UML-driven, stress test requirements generation with the aim of increasing chances of discovering faults relating to networ...
Vahid Garousi