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SDM
2007
SIAM
184views Data Mining» more  SDM 2007»
15 years 4 months ago
Mining Naturally Smooth Evolution of Clusters from Dynamic Data
Many clustering algorithms have been proposed to partition a set of static data points into groups. In this paper, we consider an evolutionary clustering problem where the input d...
Yi Wang, Shi-Xia Liu, Jianhua Feng, Lizhu Zhou
152
Voted
AAAI
1994
15 years 4 months ago
Solution Reuse in Dynamic Constraint Satisfaction Problems
Many AI problems can be modeled as constraint satisfaction problems (CSP), but many of them are actually dynamic: the set of constraints to consider evolves because of the environ...
Gérard Verfaillie, Thomas Schiex
149
Voted
BMCBI
2010
143views more  BMCBI 2010»
15 years 2 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
154
Voted
BMCBI
2010
115views more  BMCBI 2010»
15 years 2 months ago
Importance of replication in analyzing time-series gene expression data: Corticosteroid dynamics and circadian patterns in rat l
Background: Microarray technology is a powerful and widely accepted experimental technique in molecular biology that allows studying genome wide transcriptional responses. However...
Tung T. Nguyen, Richard R. Almon, Debra C. DuBois,...
122
Voted
BMCBI
2008
165views more  BMCBI 2008»
15 years 2 months ago
Peak intensity prediction in MALDI-TOF mass spectrometry: A machine learning study to support quantitative proteomics
Background: Mass spectrometry is a key technique in proteomics and can be used to analyze complex samples quickly. One key problem with the mass spectrometric analysis of peptides...
Wiebke Timm, Alexandra Scherbart, Sebastian Bö...