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RECOMB
2001
Springer
14 years 9 months ago
Predicting the beta-helix fold from protein sequence data
A method is presented that uses b-strand interactions to predict the parallel right-handed b-helix super-secondary structural motif in protein sequences. A program called BetaWrap...
Phil Bradley, Lenore Cowen, Matthew Menke, Jonatha...
ISMB
1993
13 years 10 months ago
Transmembrane Segment Prediction from Protein Sequence Data
Weconsider tile automatedidentification of transmembrane domains in membrane protein sequences. 324 proteins (containing 1585 segrrmnts) werc examined, representing every protein ...
Sholom M. Weiss, Dawn M. Cohen, Nitin Indurkhya
BIBE
2010
IEEE
143views Bioinformatics» more  BIBE 2010»
13 years 10 months ago
The Effect of Sequence Error and Partial Training Data on BLAST Accuracy
- Metagenomics is the study of environmental samples. Because few tools exist for metagenomic analysis, a natural step has been to utilize the popular homology tool, BLAST, to sear...
Steven D. Essinger, Gail L. Rosen
TCBB
2011
13 years 4 months ago
Data Mining on DNA Sequences of Hepatitis B Virus
: Extraction of meaningful information from large experimental datasets is a key element of bioinformatics research. One of the challenges is to identify genomic markers in Hepatit...
Kwong-Sak Leung, Kin-Hong Lee, Jin Feng Wang, Eddi...
ACIIDS
2009
IEEE
144views Database» more  ACIIDS 2009»
14 years 2 months ago
Processing Exact Results for Sliding Window Joins over Time-Sequence, Streaming Data Using a Disk Archive
— We consider the problem of processing exact results for sliding window joins over data streams with limited memory. Existing approaches deal with memory limitations by shedding...
Abhirup Chakraborty, Ajit Singh