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BMCBI
2010
139views more  BMCBI 2010»
13 years 8 months ago
A highly efficient multi-core algorithm for clustering extremely large datasets
Background: In recent years, the demand for computational power in computational biology has increased due to rapidly growing data sets from microarray and other high-throughput t...
Johann M. Kraus, Hans A. Kestler
IDA
2009
Springer
14 years 2 months ago
Bayesian Non-negative Matrix Factorization
Abstract. We present a Bayesian treatment of non-negative matrix factorization (NMF), based on a normal likelihood and exponential priors, and derive an efficient Gibbs sampler to ...
Mikkel N. Schmidt, Ole Winther, Lars Kai Hansen
DCOSS
2011
Springer
12 years 7 months ago
A local average consensus algorithm for wireless sensor networks
—In many application scenarios sensors need to calculate the average of some local values, e.g. of local measurements. A possible solution is to rely on consensus algorithms. In ...
Konstantin Avrachenkov, Mahmoud El Chamie, Giovann...
BMCBI
2008
126views more  BMCBI 2008»
13 years 8 months ago
FCI: an R-based algorithm for evaluating uncertainty of absolute real-time PCR quantification
Background: FCI is an R code for analyzing data from real-time PCR experiments. This algorithm estimates standard curve features as well as nucleic acid concentrations and confide...
Paolo Verderio, Sara Pizzamiglio, Fabio Gallo, Sim...
PRIB
2010
Springer
123views Bioinformatics» more  PRIB 2010»
13 years 6 months ago
Machine Learning Study of DNA Binding by Transcription Factors from the LacI Family
We studied 1372 LacI-family transcription factors and their 4484 DNA binding sites using machine learning algorithms and feature selection techniques. The Naive Bayes classifier a...
Gennady G. Fedonin, Mikhail S. Gelfand