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» On Approximating Multidimensional Probability Distributions ...
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138
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JCB
2008
106views more  JCB 2008»
15 years 2 months ago
Statistics of Random Protein Superpositions: p-Values for Pairwise Structure Alignment
Quantification of statistical significance is essential for the interpretation of protein structural similarity. To address this, a random model for protein structure comparison w...
James O. Wrabl, Nick V. Grishin
141
Voted
BCB
2010
140views Bioinformatics» more  BCB 2010»
14 years 9 months ago
Guiding belief propagation using domain knowledge for protein-structure determination
A major bottleneck in high-throughput protein crystallography is producing protein-structure models from an electrondensity map. In previous work, we developed Acmi, a probabilist...
Ameet Soni, Craig A. Bingman, Jude W. Shavlik
105
Voted
APPROX
2007
Springer
87views Algorithms» more  APPROX 2007»
15 years 6 months ago
Stochastic Steiner Tree with Non-uniform Inflation
We study the Steiner Tree problem in the model of two-stage stochastic optimization with non-uniform inflation factors, and give a poly-logarithmic approximation factor for this pr...
Anupam Gupta, MohammadTaghi Hajiaghayi, Amit Kumar
147
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SIGMOD
2011
ACM
241views Database» more  SIGMOD 2011»
14 years 5 months ago
Neighborhood based fast graph search in large networks
Complex social and information network search becomes important with a variety of applications. In the core of these applications, lies a common and critical problem: Given a labe...
Arijit Khan, Nan Li, Xifeng Yan, Ziyu Guan, Supriy...
NIPS
2004
15 years 4 months ago
Constraining a Bayesian Model of Human Visual Speed Perception
It has been demonstrated that basic aspects of human visual motion perception are qualitatively consistent with a Bayesian estimation framework, where the prior probability distri...
Alan Stocker, Eero P. Simoncelli