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» On Compressibility of Protein Sequences
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ECML
2007
Springer
14 years 4 months ago
Separating Precision and Mean in Dirichlet-Enhanced High-Order Markov Models
Abstract. Robustly estimating the state-transition probabilities of highorder Markov processes is an essential task in many applications such as natural language modeling or protei...
Rikiya Takahashi
IPPS
2005
IEEE
14 years 3 months ago
FROST: Revisited and Distributed
FROST (Fold Recognition-Oriented Search Tool) [6] is a software whose purpose is to assign a 3D structure to a protein sequence. It is based on a series of filters and uses a dat...
Vincent Poirriez, Rumen Andonov, Antoine Marin, Je...
CIBCB
2005
IEEE
14 years 4 days ago
A Transcriptional Approach to Gene Clustering
— We present an integrative method for clustering coregulated genes and elucidating their underlying regulatory mechanisms. We use multi-state partition functions and thermodynam...
Ilias Tagkopoulos
NAR
2007
128views more  NAR 2007»
13 years 9 months ago
Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis
Phylogenomic analysis addresses the limitations of function prediction based on annotation transfer, and has been shown to enable the highest accuracy in prediction of protein mol...
Jake Gunn Glanville, Dan Kirshner, Nandini Krishna...
ICIP
1998
IEEE
14 years 11 months ago
Reducing the Computational Complexity of a Map Post-Processing Algorithm for Video Sequences
Maximum a posteriori (MAP) filtering using the HuberMarkov random field (HMRF) image model has been shown in the past to be an effective method of reducing compression artifacts i...
Mark A. Robertson, Robert L. Stevenson