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» On Compressibility of Protein Sequences
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BIOINFORMATICS
2008
97views more  BIOINFORMATICS 2008»
13 years 10 months ago
An integrated system for studying residue coevolution in proteins
Residue coevolution has recently emerged as an important concept, especially in the context of protein structures. While a multitude of different functions for quantifying it have...
Kevin Y. Yip, Prianka Patel, Philip M. Kim, Donald...
BMCBI
2006
110views more  BMCBI 2006»
13 years 10 months ago
Design of a combinatorial DNA microarray for protein-DNA interaction studies
Background: Discovery of precise specificity of transcription factors is an important step on the way to understanding the complex mechanisms of gene regulation in eukaryotes. Rec...
Julian Mintseris, Michael B. Eisen
ICDE
2012
IEEE
212views Database» more  ICDE 2012»
12 years 17 days ago
Attribute-Based Subsequence Matching and Mining
—Sequence analysis is very important in our daily life. Typically, each sequence is associated with an ordered list of elements. For example, in a movie rental application, a cus...
Yu Peng, Raymond Chi-Wing Wong, Liangliang Ye, Phi...
JOBIM
2000
14 years 1 months ago
InterDB, a Prediction-Oriented Protein Interaction Database for C. elegans
Protein-protein interactions are critical to many biological processes, extending from the formation of cellular macromolecular structures and enzymatic complexes to the regulation...
Nicolas Thierry-Mieg, Laurent Trilling
BMCBI
2010
103views more  BMCBI 2010»
13 years 10 months ago
Predicting the protein-protein interactions using primary structures with predicted protein surface
Background: Many biological functions involve various protein-protein interactions (PPIs). Elucidating such interactions is crucial for understanding general principles of cellula...
Darby Tien-Hao Chang, Yu-Tang Syu, Po-Chang Lin