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» On Compressibility of Protein Sequences
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ALMOB
2006
138views more  ALMOB 2006»
13 years 10 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
ICIP
2008
IEEE
14 years 12 months ago
Kalman filtered Compressed Sensing
We consider the problem of reconstructing time sequences of spatially sparse signals (with unknown and time-varying sparsity patterns) from a limited number of linear "incohe...
Namrata Vaswani
ICIP
2006
IEEE
14 years 11 months ago
A Multi-Terminal Model-Based Video Compression Algorithm
We present a novel 3D model-based distributed video coding algorithm. It is based on independent, model-based tracking of multiple sources and distributed coding of the tracked fe...
Bi Song, Amit K. Roy Chowdhury, Ertem Tuncel
JMM2
2007
82views more  JMM2 2007»
13 years 10 months ago
Towards A Multi-Terminal Video Compression Algorithm By Integrating Distributed Source Coding With Geometrical Constraints
Abstract— In this paper, we present a framework for multiterminal video compression (MTVC) that exploits the geometric constraints between cameras with overlapping fields of vie...
Bi Song, Ertem Tuncel, Amit K. Roy Chowdhury
BMCBI
2010
101views more  BMCBI 2010»
13 years 10 months ago
Hidden Markov model speed heuristic and iterative HMM search procedure
Background: Profile hidden Markov models (profile-HMMs) are sensitive tools for remote protein homology detection, but the main scoring algorithms, Viterbi or Forward, require con...
L. Steven Johnson, Sean R. Eddy, Elon Portugaly