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» On Compressibility of Protein Sequences
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DCC
2006
IEEE
14 years 9 months ago
Non-Asymptotic Design of Finite State Universal Predictors for Individual Sequences
In this work we consider the problem of universal prediction of individual sequences where the universal predictor is a deterministic finite state machine, with a fixed, relativel...
Amir Ingber, Meir Feder
WISA
2007
Springer
14 years 4 months ago
Detecting Motifs in System Call Sequences
The search for patterns or motifs in data represents an area of key interest to many researchers. In this paper we present the Motif Tracking Algorithm, a novel immune inspired pat...
William O. Wilson, Jan Feyereisl, Uwe Aickelin
ICIP
2009
IEEE
14 years 11 months ago
Efficient Edge, Motion And Depth-range Adaptive Processing For Enhancement Of Multi-view Depth Map Sequences
We present a novel and efficient multi-view depth map enhancement method proposed as a post-processing of initially estimated depth maps. The proposed method is based on edge, mot...
BIBE
2005
IEEE
14 years 3 months ago
Improved Phylogenetic Motif Detection Using Parsimony
We have recently demonstrated (La et al, Proteins, 58:2005) that sequence fragments approximating the overall familial phylogeny, called phylogenetic motifs (PMs), represent a pro...
Usman Roshan, Dennis R. Livesay, David La
SC
2003
ACM
14 years 3 months ago
A Million-Fold Speed Improvement in Genomic Repeats Detection
This paper presents a novel, parallel algorithm for generating top alignments. Top alignments are used for finding internal repeats in biological sequences like proteins and gene...
John W. Romein, Jaap Heringa, Henri E. Bal