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» On Compressibility of Protein Sequences
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CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
14 years 2 months ago
Peptide Charge State Determination for Low-Resolution Tandem Mass Spectra
Mass spectrometry is a particularly useful technology for the rapid and robust identification of peptides and proteins in complex mixtures. Peptide sequences can be identified b...
Aaron A. Klammer, Christine C. Wu, Michael J. MacC...
LPAR
2005
Springer
14 years 2 months ago
Comparative Similarity, Tree Automata, and Diophantine Equations
The notion of comparative similarity ‘X is more similar or closer to Y than to Z’ has been investigated in both foundational and applied areas of knowledge representation and r...
Mikhail Sheremet, Dmitry Tishkovsky, Frank Wolter,...
ACMSE
2007
ACM
14 years 27 days ago
Finding association rules of cis-regulatory elements involved in alternative splicing
Alternative splicing (AS) is a major mechanism to generate protein diversity. A single gene might generate hundreds or even thousands of different proteins. Recently, powerful lar...
Jihye Kim, Sihui Zhao, Steffen Heber
NIPS
2008
13 years 10 months ago
Scalable Algorithms for String Kernels with Inexact Matching
We present a new family of linear time algorithms based on sufficient statistics for string comparison with mismatches under the string kernels framework. Our algorithms improve t...
Pavel P. Kuksa, Pai-Hsi Huang, Vladimir Pavlovic
NAR
2006
75views more  NAR 2006»
13 years 8 months ago
DrugBank: a comprehensive resource for in silico drug discovery and exploration
DrugBank is a unique bioinformatics/cheminformatics resource that combines detailed drug (i.e. chemical)data withcomprehensive drug target (i.e.protein) information. The database ...
David S. Wishart, Craig Knox, Anchi Guo, Savita Sh...