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» On Compressibility of Protein Sequences
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NIPS
2008
13 years 10 months ago
Tighter Bounds for Structured Estimation
Large-margin structured estimation methods minimize a convex upper bound of loss functions. While they allow for efficient optimization algorithms, these convex formulations are n...
Olivier Chapelle, Chuong B. Do, Quoc V. Le, Alexan...
BMCBI
2006
131views more  BMCBI 2006»
13 years 8 months ago
inGeno - an integrated genome and ortholog viewer for improved genome to genome comparisons
Background: Systematic genome comparisons are an important tool to reveal gene functions, pathogenic features, metabolic pathways and genome evolution in the era of post-genomics....
Chunguang Liang, Thomas Dandekar
NAR
2006
75views more  NAR 2006»
13 years 8 months ago
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
The OrthoMCL database (http://orthomcl.cbil.upenn. edu) houses ortholog group predictions for 55 spe10 cies, including 16 bacterial and 4 archaeal genomes representing phylogeneti...
Feng Chen, Aaron J. Mackey, Christian J. Stoeckert...
ECEASST
2010
13 years 6 months ago
Self Organized Swarms for cluster preserving Projections of high-dimensional Data
: A new approach for topographic mapping, called Swarm-Organized Projection (SOP) is presented. SOP has been inspired by swarm intelligence methods for clustering and is similar to...
Alfred Ultsch, Lutz Herrmann
CCA
2009
Springer
14 years 3 months ago
Separations of Non-monotonic Randomness Notions
In the theory of algorithmic randomness, several notions of random sequence are defined via a game-theoretic approach, and the notions that received most attention are perhaps Mar...
Laurent Bienvenu, Rupert Hölzl, Thorsten Kr&a...