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» On Compressibility of Protein Sequences
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ICPR
2004
IEEE
14 years 11 months ago
Super-Resolving Compressed Video with Large Artifacts
We propose methods to super-resolve compressed video sequences that may consist of frames with missing blocks of pixels in addition to compression artifacts. Different from tradit...
Wen-Yi Zhao
WEA
2007
Springer
125views Algorithms» more  WEA 2007»
14 years 4 months ago
Simple Compression Code Supporting Random Access and Fast String Matching
Given a sequence S of n symbols over some alphabet Σ, we develop a new compression method that is (i) very simple to implement; (ii) provides O(1) time random access to any symbol...
Kimmo Fredriksson, Fedor Nikitin
BMCBI
2006
165views more  BMCBI 2006»
13 years 10 months ago
Improving the quality of protein structure models by selecting from alignment alternatives
Background: In the area of protein structure prediction, recently a lot of effort has gone into the development of Model Quality Assessment Programs (MQAPs). MQAPs distinguish hig...
Ingolf Sommer, Stefano Toppo, Oliver Sander, Thoma...
NAR
2007
124views more  NAR 2007»
13 years 9 months ago
EVEREST: a collection of evolutionary conserved protein domains
Protein domains are subunits of proteins that recur throughout the protein world. There are many definitions attempting to capture the essence of a protein domain, and several sys...
Elon Portugaly, Nathan Linial, Michal Linial
DATESO
2007
157views Database» more  DATESO 2007»
13 years 11 months ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal