Background: Transcriptional regulation in eukaryotes often involves multiple transcription factors binding to the same transcription control region, and to understand the regulato...
Derek Y. Chiang, Alan M. Moses, Manolis Kamvysseli...
We develop a new framework for inferring models of transcriptional regulation. The models in this approach, which we call physical models, are constructed on the basis of verifiab...
We present algorithms for time-series gene expression analysis that permit the principled estimation of unobserved timepoints, clustering, and dataset alignment. Each expression p...
Ziv Bar-Joseph, Georg Gerber, David K. Gifford, To...
The growing nature of databases, and the flexibility inherent in the SQL query language that allows arbitrarily complex formulations, can result in queries that take inordinate am...
In the rank join problem we are given a relational join R1 1 R2 and a function that assigns numeric scores to the join tuples, and the goal is to return the tuples with the highes...