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» On Extremal Cases of Hopcroft's Algorithm
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ICDT
2009
ACM
128views Database» more  ICDT 2009»
14 years 9 months ago
Efficient asymmetric inclusion between regular expression types
The inclusion of Regular Expressions (REs) is the kernel of any type-checking algorithm for XML manipulation languages. XML applications would benefit from the extension of REs wi...
Dario Colazzo, Giorgio Ghelli, Carlo Sartiani
STOC
2006
ACM
129views Algorithms» more  STOC 2006»
14 years 8 months ago
Optimal phylogenetic reconstruction
One of the major tasks of evolutionary biology is the reconstruction of phylogenetic trees from molecular data. The evolutionary model is given by a Markov chain on the true evolu...
Constantinos Daskalakis, Elchanan Mossel, Sé...
GECCO
2007
Springer
183views Optimization» more  GECCO 2007»
14 years 2 months ago
Distribution replacement: how survival of the worst can out perform survival of the fittest
A new family of "Distribution Replacement” operators for use in steady state genetic algorithms is presented. Distribution replacement enforces the members of the populatio...
Howard Tripp, Phil Palmer
JUCS
2010
161views more  JUCS 2010»
13 years 6 months ago
Evaluating Linear XPath Expressions by Pattern-Matching Automata
: We consider the problem of efficiently evaluating a large number of XPath expressions, especially in the case when they define subscriber profiles for filtering of XML documen...
Panu Silvasti, Seppo Sippu, Eljas Soisalon-Soinine...
BMCBI
2006
92views more  BMCBI 2006»
13 years 8 months ago
Recrafting the neighbor-joining method
Background: The neighbor-joining method by Saitou and Nei is a widely used method for constructing phylogenetic trees. The formulation of the method gives rise to a canonical (n3)...
Thomas Mailund, Gerth Stølting Brodal, Rolf...