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» On Finding Large Conjunctive Clusters
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BMCBI
2006
126views more  BMCBI 2006»
13 years 8 months ago
Effect of data normalization on fuzzy clustering of DNA microarray data
Background: Microarray technology has made it possible to simultaneously measure the expression levels of large numbers of genes in a short time. Gene expression data is informati...
Seo Young Kim, Jae Won Lee, Jong Sung Bae
NIPS
2008
13 years 10 months ago
Clusters and Coarse Partitions in LP Relaxations
We propose a new class of consistency constraints for Linear Programming (LP) relaxations for finding the most probable (MAP) configuration in graphical models. Usual cluster-base...
David Sontag, Amir Globerson, Tommi Jaakkola
IJPP
2008
74views more  IJPP 2008»
13 years 8 months ago
Bandwidth Efficient All-to-All Broadcast on Switched Clusters
We develop an all-to-all broadcast scheme that achieves maximum bandwidth efficiency for clusters with tree topologies. Using our scheme for clusters with cut-through switches, an...
Ahmad Faraj, Pitch Patarasuk, Xin Yuan
CGF
2010
118views more  CGF 2010»
13 years 8 months ago
The Readability of Path-Preserving Clusterings of Graphs
Graph visualization systems often exploit opaque metanodes to reduce visual clutter and improve the readability of large graphs. This filtering can be done in a path-preserving wa...
Daniel Archambault, Helen C. Purchase, Bruno Pinau...
BMCBI
2010
125views more  BMCBI 2010»
13 years 9 months ago
NeatMap - non-clustering heat map alternatives in R
Background: The clustered heat map is the most popular means of visualizing genomic data. It compactly displays a large amount of data in an intuitive format that facilitates the ...
Satwik Rajaram, Yoshi Oono