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» On Optimizing Distance-Based Similarity Search for Biologica...
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BMCBI
2008
173views more  BMCBI 2008»
13 years 8 months ago
Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
Background: Microarray experiments measure changes in the expression of thousands of genes. The resulting lists of genes with changes in expression are then searched for biologica...
Stephen W. Tanner, Pankaj Agarwal
DEXA
2010
Springer
187views Database» more  DEXA 2010»
13 years 6 months ago
Pivot Selection Method for Optimizing both Pruning and Balancing in Metric Space Indexes
We researched to try to find a way to reduce the cost of nearest neighbor searches in metric spaces. Many similarity search indexes recursively divide a region into subregions by u...
Hisashi Kurasawa, Daiji Fukagawa, Atsuhiro Takasu,...
BIRTHDAY
2010
Springer
14 years 1 months ago
Indexing and Searching a Mass Spectrometry Database
Abstract. Database preprocessing in order to create an index often permits considerable speedup in search compared to the iterated query of an unprocessed database. In this paper w...
Søren Besenbacher, Benno Schwikowski, Jens ...
BMCBI
2006
172views more  BMCBI 2006»
13 years 8 months ago
A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data
Background: Tandem mass spectrometry (MS/MS) is a powerful tool for protein identification. Although great efforts have been made in scoring the correlation between tandem mass sp...
Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang,...
TCSV
2010
13 years 2 months ago
Efficient and Robust Detection of Duplicate Videos in a Large Database
We present an efficient and accurate method for duplicate video detection in a large database using video fingerprints. We have empirically chosen the Color Layout Descriptor, a c...
Anindya Sarkar, Vishwakarma Singh, Pratim Ghosh, B...