Sciweavers

78 search results - page 14 / 16
» On The Closest String and Substring Problems
Sort
View
CSB
2003
IEEE
14 years 25 days ago
Fast and Sensitive Probe Selection for DNA Chips Using Jumps in Matching Statistics
The design of large scale DNA microarrays is a challenging problem. So far, probe selection algorithms must trade the ability to cope with large scale problems for a loss of accur...
Sven Rahmann
JCP
2008
104views more  JCP 2008»
13 years 7 months ago
Analysis and Improved Recognition of Protein Names Using Transductive SVM
We first analyzed protein names using various dictionaries and databases and found five problems with protein names; i.e., the treatment of special characters, the treatment of hom...
Masaki Murata, Tomohiro Mitsumori, Kouichi Doi
IPPS
2003
IEEE
14 years 25 days ago
PROSIDIS: A Special Purpose Processor for PROtein SImilarity DIScovery
This work presents the architecture of PROSIDIS, a special purpose processor designed to search for the occurrence of substrings similar to a given ‘template string’ within a ...
Alessandro Marongiu, Paolo Palazzari, Vittorio Ros...
LATA
2009
Springer
14 years 2 months ago
Counting Parameterized Border Arrays for a Binary Alphabet
The parameterized pattern matching problem is a kind of pattern matching problem, where a pattern is considered to occur in a text when there exists a renaming bijection on the alp...
Tomohiro I, Shunsuke Inenaga, Hideo Bannai, Masayu...
WABI
2004
Springer
14 years 26 days ago
Finding Optimal Pairs of Patterns
We consider the problem of finding the optimal pair of string patterns for discriminating between two sets of strings, i.e. finding the pair of patterns that is best with respect...
Hideo Bannai, Heikki Hyyrö, Ayumi Shinohara, ...