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» On The Closest String and Substring Problems
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CPM
2004
Springer
110views Combinatorics» more  CPM 2004»
14 years 28 days ago
On the k-Closest Substring and k-Consensus Pattern Problems
Given a set S = {s1, s2, . . . , sn} of strings each of length m, and an integer L, we study the following two problems. k-Closest Substring problem: find k center strings c1, c2,...
Yishan Jiao, Jingyi Xu, Ming Li
GECCO
2009
Springer
152views Optimization» more  GECCO 2009»
14 years 4 days ago
A data-based coding of candidate strings in the closest string problem
Given a set of strings S of equal lengths over an alphabet Σ, the closest string problem seeks a string over Σ whose maximum Hamming distance to any of the given strings is as s...
Bryant A. Julstrom
APPROX
2005
Springer
90views Algorithms» more  APPROX 2005»
14 years 1 months ago
Tight Bounds for String Reconstruction Using Substring Queries
We resolve two open problems presented in [8]. First, we consider the problem of reconstructing an unknown string T over a fixed alphabet using queries of the form “does the st...
Dekel Tsur
COCOON
2010
Springer
13 years 11 months ago
A Three-String Approach to the Closest String Problem
Given a set of n strings of length L and a radius d, the closest string problem (CSP for short) asks for a string tsol that is within a Hamming distance of d to each of the given ...
Zhi-Zhong Chen, Bin Ma, Lusheng Wang
CORR
2010
Springer
156views Education» more  CORR 2010»
13 years 7 months ago
The Exact Closest String Problem as a Constraint Satisfaction Problem
We report (to our knowledge) the first evaluation of Constraint Satisfaction as a computational framework for solving closest string problems. We show that careful consideration o...
Tom Kelsey, Lars Kotthoff